Automatic brain mask computation in quasi raw + bug fixed for software version#19

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Duplums wants to merge 9 commits intobrainprepdesk:mainfrom

Duplums:extension

Commits on Jun 3, 2025

Dockerfile updated for Ubuntu20.04
Benoit Dufumier
committed
Quasi-raw updated to handle missing mask with BET2
Benoit Dufumier
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Docker updated to handle Py3.9+Ubuntu 20
Benoit Dufumier
committed

Commits on Jun 4, 2025

cleaner fsl install
Benoit Dufumier
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FreeSurfer v7.4.1 handling SynthStrip
Benoit Dufumier
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synthstrip for masking
Benoit Dufumier
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cleanup in quasiraw pipeline added
Benoit Dufumier
committed

Commits on Jun 5, 2025

bug fixed for N4
Duplums
committed

Commits on Jun 24, 2025

quasiraw-sitk pipeline added
Benoit Dufumier
committed